Transcript: DUBR:8
Basic information
LNCipedia transcript ID: DUBR:8
HGNC Gene Symbol: DUBR
HGNC Full Gene Name:
DPPA2 upstream binding RNA
Ensembl Gene ID:
ENSG00000243701
Ensembl Transcript ID:
ENST00000473550
Location (hg38): chr3:107240721-107245508
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 738 bp
Exons: 2
Sources: Biogazelle lncRNA chip; Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000473550; TCONS_00005565; ENST00000473550.1; RP11-446H18.3-003; OTTHUMT00000353693.1; NONHSAT091029
Alternative gene names: ENSG00000243701; XLOC_002746; linc-CCDC54; RP11-446H18.3; ENSG00000243701.1; OTTHUMG00000159173.1; LINC00883; ENSG00000243701.5; DUBR;
RNA sequence:
Structure:
Protein coding potential
In stringent set: no
Locus conservation
Locus conservation? | ||||
---|---|---|---|---|
DUBR:8 | no | no | no | no |
Available literature
- Wang (2015), LncRNA Dum interacts with Dnmts to regulate Dppa2 expression during myogenic differentiation and muscle regeneration., Cell Res.
- Perry (2014), Role of non-coding RNAs in maintaining primary airway smooth muscle cells., Respir. Res.
LNCipedia transcript ID history
LNCipedia version | LNCipedia transcript ID |
---|---|
1.3 | lnc-CCDC54-2:6 |
3.1 | lnc-CCDC54-2:6 |
4.0 | DUBR:8 |
4.1 | DUBR:8 |
5.0 | DUBR:8 |
5.1 | DUBR:8 |
5.2 | DUBR:8 |