Transcript: MRGPRF-AS1:4

Basic information

LNCipedia transcript ID: MRGPRF-AS1:4 
LNCipedia gene ID: MRGPRF-AS1
Location (hg38): chr11:69012431-69018445
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1488 bp
Exons: 6
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011
Alternative transcript names: ENST00000538407
Alternative gene names: ENSG00000256508; AP003071.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -14.4874 non-coding 
CPAT coding probability 5.52% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MRGPRF-AS1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TPCN2-1:1
3.1 lnc-TPCN2-2:3
4.0 MRGPRF-AS1:4
4.1 MRGPRF-AS1:4
5.0 MRGPRF-AS1:4
5.1 MRGPRF-AS1:4
5.2 MRGPRF-AS1:4