Transcript: PIK3CD-AS2:3

Basic information

LNCipedia transcript ID: PIK3CD-AS2:3 
LNCipedia gene ID: PIK3CD-AS2
RefSeq ID: NR_126368
Location (hg38): chr1:9680845-9687574
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 531 bp
Exons: 2
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_126368; NR_126368.1
Alternative gene names: ; PIK3CD-AS2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -112.2884 non-coding 
CPAT coding probability 1.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PIK3CD-AS2:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C1orf200-1:5
4.0 PIK3CD-AS2:3
4.1 PIK3CD-AS2:3
5.0 PIK3CD-AS2:3
5.1 PIK3CD-AS2:3
5.2 PIK3CD-AS2:3