Transcript: lnc-ZFHX3-27:9

Basic information

LNCipedia transcript ID: lnc-ZFHX3-27:9 
LNCipedia gene ID: lnc-ZFHX3-27
Location (hg38): chr16:74205791-74215989
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 399 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00024728; NONHSAT143659
Alternative gene names: XLOC_012007; linc-ZFHX3-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -79.3559 non-coding 
CPAT coding probability 3.94% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZFHX3-27:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CLEC18B-2:2
3.1 lnc-CLEC18B-3:4
4.0 lnc-CLEC18B-3:4
4.1 lnc-CLEC18B-3:4
5.0 lnc-CLEC18B-3:4
5.1 lnc-MLKL-27:9
5.2 lnc-ZFHX3-27:9