Transcript: lnc-ERV3-1-10:6

Basic information

LNCipedia transcript ID: lnc-ERV3-1-10:6 
LNCipedia gene ID: lnc-ERV3-1-10
Location (hg38): chr7:65762431-65770746
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1356 bp
Exons: 2
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1272:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -19.677 non-coding 
CPAT coding probability 16.73% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ERV3-1-10:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-ERV3-1-10:6
4.1 lnc-ERV3-1-10:6
5.0 lnc-ERV3-1-10:6
5.1 lnc-TRIM74-105:6
5.2 lnc-ERV3-1-10:6