Transcript: lnc-MTRNR2L1-12:1

Basic information

LNCipedia transcript ID: lnc-MTRNR2L1-12:1 ?
LNCipedia gene ID: lnc-MTRNR2L1-12
Location (hg19): chr17:23399106-23399415
Strand: +
Class: undefined
Transcript size: 310 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: expReg_chr17_3070_+
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential


Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding ?
Lee translation initiation sites 0 non-coding ?
Highest peak:0
PhyloCSF score non-coding ?
CPAT coding probability 0.04% non-coding ?
Bazzini small ORFs 0 non-coding ?
In stringent set: no

Locus conservation

Locus conservation?
lnc-MTRNR2L1-12:1 no no

Secondary structure information

RNAfold image: download
Randfold minimum free energy:
Randfold P-value:

Targetting miRNAs

No microRNA targets found with MirTarget2

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version Deprecated transcript ID
3.1 lnc-MTRNR2L1-12:1