Transcript: lnc-MYO19-1:1

Basic information

LNCipedia transcript ID: lnc-MYO19-1:1 
LNCipedia gene ID: lnc-MYO19-1
Location (hg38): chr17:36541733-36544829
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1365 bp
Exons: 2
Sources: Biogazelle lncRNA chip; Broad Institute; Ensembl release 64 - Sep 2011; NONCODE v4
Alternative transcript names: ENST00000499603; TCONS_00025223; NONHSAT053231
Alternative gene names: ENSG00000245538; XLOC_012451; linc-MYO19-2; AC126327.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -91.2406 non-coding 
CPAT coding probability 0.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MYO19-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MYO19-1:1
3.1 lnc-MYO19-1:1
4.0 lnc-MYO19-1:1
4.1 lnc-MYO19-1:1
5.0 lnc-MYO19-1:1
5.1 lnc-SRCIN1-51:2
5.2 lnc-MYO19-1:1