Transcript: lnc-NAA50-3:1

Basic information

LNCipedia transcript ID: lnc-NAA50-3:1 
LNCipedia gene ID: lnc-NAA50-3
Location (hg38): chr3:113799578-113811054
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1038 bp
Exons: 2
Sources: Biogazelle lncRNA chip
Alternative transcript names: ENST00000425915
Alternative gene names: ENSG00000223613


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -102.6901 non-coding 
CPAT coding probability 0.18% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NAA50-3:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-NAA50-3:1
3.1 lnc-NAA50-3:1
4.0 lnc-NAA50-3:1
4.1 lnc-NAA50-3:1
5.0 lnc-NAA50-3:1
5.1 lnc-NEPRO-27:1
5.2 lnc-NAA50-3:1