Transcript: LINC01725:47

Basic information

LNCipedia transcript ID: LINC01725:47 
LNCipedia gene ID: LINC01725
Location (hg38): chr1:83378242-83633688
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2652 bp
Exons: 12
Sources: Nielsen et al.,2014
Alternative transcript names: l_77_chr1:83843924-84099168_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -69.5406 non-coding 
CPAT coding probability 0.65% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01725:47 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TTLL7-2:8
4.0 lnc-TTLL7-2:8
4.1 lnc-TTLL7-2:8
5.0 lnc-TTLL7-2:8
5.1 LINC01725:22
5.2 LINC01725:47