Transcript: LINC01725:48

Basic information

LNCipedia transcript ID: LINC01725:48 
LNCipedia gene ID: LINC01725
Location (hg38): chr1:83604209-83633611
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 400 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT004163
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -17.0621 non-coding 
CPAT coding probability 0.51% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01725:48 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TTLL7-2:9
4.0 lnc-TTLL7-2:9
4.1 lnc-TTLL7-2:9
5.0 lnc-TTLL7-2:9
5.1 LINC01725:23
5.2 LINC01725:48