Transcript: lnc-DCAF1-1:1

Basic information

LNCipedia transcript ID: lnc-DCAF1-1:1 
LNCipedia gene ID: lnc-DCAF1-1
Location (hg38): chr3:51391351-51394502
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2446 bp
Exons: 2
Sources: Biogazelle lncRNA chip
Alternative transcript names: ENST00000506856
Alternative gene names: ENSG00000250864


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 729.7057 coding 
CPAT coding probability 90.56% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-DCAF1-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-VPRBP-1:1
3.1 lnc-VPRBP-1:1
4.0 lnc-VPRBP-1:1
4.1 lnc-VPRBP-1:1
5.0 lnc-VPRBP-1:1
5.1 lnc-HYAL3-22:1
5.2 lnc-DCAF1-1:1