Transcript: DARS-AS1:16

Basic information

LNCipedia transcript ID: DARS-AS1:16 
HGNC Gene Symbol: DARS-AS1    
HGNC Full Gene Name: DARS antisense RNA 1
Ensembl Gene ID: ENSG00000231890
Ensembl Transcript ID: ENST00000597450
Location (hg38): chr2:135999648-136007757
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1394 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT074619; ENST00000597450.1
Alternative gene names: ENSG00000231890.3; AC093391.2; ENSG00000231890.7; DARS-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 12.3588 non-coding 
CPAT coding probability 4.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
DARS-AS1:16 no no no no

Available literature

  1. Mimura (2017), Novel lnc RNA regulated by HIF-1 inhibits apoptotic cell death in the renal tubular epithelial cells under hypoxia., Physiol Rep


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-UBXN4-2:16
4.0 DARS-AS1:16
4.1 DARS-AS1:16
5.0 DARS-AS1:16
5.1 DARS-AS1:16
5.2 DARS-AS1:16