Transcript: DLG5-AS1:3

Basic information

LNCipedia transcript ID: DLG5-AS1:3 
HGNC Gene Symbol: DLG5-AS1    
HGNC Full Gene Name: DLG5 antisense RNA 1
Ensembl Gene ID: ENSG00000233871
Ensembl Transcript ID: ENST00000449852
Location (hg38): chr10:77927372-77929824
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 487 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000449852.1; RP11-126H7.3-001; OTTHUMT00000048899.1; NONHSAT015044
Alternative gene names: ENSG00000233871.1; RP11-126H7.3; OTTHUMG00000018547.1; DLG5-AS1; ENSG00000233871.2;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -134.0603 non-coding 
CPAT coding probability 6.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
DLG5-AS1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AL391421.1-1:1
4.0 DLG5-AS1:3
4.1 DLG5-AS1:3
5.0 DLG5-AS1:3
5.1 DLG5-AS1:3
5.2 DLG5-AS1:3