Transcript: FAM66C:15

Basic information

LNCipedia transcript ID: FAM66C:15 
HGNC Gene Symbol: FAM66C    
HGNC Full Gene Name: family with sequence similarity 66 member C
Ensembl Gene ID: ENSG00000226711
Ensembl Transcript ID: ENST00000420514
Location (hg38): chr12:8194204-8196518
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 608 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000420514.2; FAM66C-008; OTTHUMT00000400458.1; ENST00000420514.6
Alternative gene names: ENSG00000226711.2; FAM66C; OTTHUMG00000168638.1; ENSG00000226711.6;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 11.1744 non-coding 
CPAT coding probability 4.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
FAM66C:15 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF705A-1:8
4.0 FAM66C:15
4.1 FAM66C:15
5.0 FAM66C:15
5.1 FAM66C:15
5.2 FAM66C:15