Transcript: LINC00866:1

Basic information

LNCipedia transcript ID: LINC00866:1 
HGNC Gene Symbol: LINC00866    
HGNC Full Gene Name: long intergenic non-protein coding RNA 866
Ensembl Gene ID: ENSG00000227356
Ensembl Transcript ID: ENST00000427379
RefSeq ID: NR_108035
Location (hg38): chr10:97828478-97849798
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 418 bp
Exons: 3
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT015886; NR_108035; ENST00000427379.2; NR_108035.1
Alternative gene names: ENSG00000227356.2; LINC00866;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -147.5368 non-coding 
CPAT coding probability 0.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00866:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CRTAC1-1:2
4.0 LINC00866:1
4.1 LINC00866:1
5.0 LINC00866:1
5.1 LINC00866:1
5.2 LINC00866:1