Transcript: LINC00866:2

Basic information

LNCipedia transcript ID: LINC00866:2 
LNCipedia gene ID: LINC00866
Location (hg38): chr10:97828478-97849778
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 396 bp
Exons: 3
Sources: Broad Institute; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: TCONS_00018031; ENST00000427379.1; RP11-459F3.3-001; OTTHUMT00000049751.1; NONHSAT015887
Alternative gene names: XLOC_008917; linc-SFRP5; ENSG00000227356.1; RP11-459F3.3; OTTHUMG00000018868.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -147.5368 non-coding 
CPAT coding probability 0.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00866:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CRTAC1-1:1
3.1 lnc-CRTAC1-1:1
4.0 LINC00866:2
4.1 LINC00866:2
5.0 LINC00866:2
5.1 LINC00866:2
5.2 LINC00866:2