Transcript: LINC01146:10

Basic information

LNCipedia transcript ID: LINC01146:10 
LNCipedia gene ID: LINC01146
Location (hg38): chr14:88024609-88096932
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 495 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000556673; ENST00000556673.1; RP11-300J18.3-008; OTTHUMT00000410159.1; NONHSAT038179
Alternative gene names: ENSG00000258867; RP11-300J18.3; ENSG00000258867.1; OTTHUMG00000170740.1; LINC01146;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -74.1145 non-coding 
CPAT coding probability 1.93% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01146:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GPR65-1:6
3.1 lnc-GPR65-1:6
4.0 LINC01146:10
4.1 LINC01146:10
5.0 LINC01146:10
5.1 LINC01146:10
5.2 LINC01146:10