Transcript: LINC01146:13

Basic information

LNCipedia transcript ID: LINC01146:13 
HGNC Gene Symbol: LINC01146    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1146
Ensembl Gene ID: ENSG00000258867
Ensembl Transcript ID: ENST00000556684
Location (hg38): chr14:88024618-88044848
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 361 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000556684; ENST00000556684.1; RP11-300J18.3-003; OTTHUMT00000410161.1; NONHSAT038181; ENST00000556684.5
Alternative gene names: ENSG00000258867; RP11-300J18.3; ENSG00000258867.1; OTTHUMG00000170740.1; LINC01146; ENSG00000258867.5;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -302.4887 non-coding 
CPAT coding probability 0.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01146:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GPR65-1:8
3.1 lnc-GPR65-1:8
4.0 LINC01146:13
4.1 LINC01146:13
5.0 LINC01146:13
5.1 LINC01146:13
5.2 LINC01146:13