Transcript: LINC01297:6

Basic information

LNCipedia transcript ID: LINC01297:6 
HGNC Gene Symbol: LINC01297    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1297
Ensembl Gene ID: ENSG00000274827
Ensembl Transcript ID: ENST00000621052
Location (hg38): chr14:19348216-19384587
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4222 bp
Exons: 4
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000621052.1
Alternative gene names: ENSG00000274827.4; LINC01297


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 41.5567 non-coding 
CPAT coding probability 17.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC01297:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 LINC01297:6
5.1 LINC01297:6
5.2 LINC01297:6