Transcript: LINC01344:3

Basic information

LNCipedia transcript ID: LINC01344:3 
HGNC Gene Symbol: LINC01344    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1344
Ensembl Gene ID: ENSG00000228918
Ensembl Transcript ID: ENST00000608183
Location (hg38): chr1:182129310-182244399
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2631 bp
Exons: 17
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000426309.1; GS1-122H1.2-001; OTTHUMT00000091037.1; NONHSAT008306; ENST00000608183.1
Alternative gene names: ENSG00000228918.1; GS1-122H1.2; OTTHUMG00000037403.1; ENSG00000228918.3; LINC01344;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 16.593 non-coding 
CPAT coding probability 16.95% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01344:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GLUL-1:2
4.0 LINC01344:3
4.1 LINC01344:3
5.0 LINC01344:3
5.1 LINC01344:3
5.2 LINC01344:3