Transcript: LINC01389:1

Basic information

LNCipedia transcript ID: LINC01389:1 
LNCipedia gene ID: LINC01389
Location (hg38): chr1:47380746-47437685
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1279 bp
Exons: 5
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA107:3
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 3.0789 non-coding 
CPAT coding probability 2.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01389:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 LINC01389:1
4.1 LINC01389:1
5.0 LINC01389:1
5.1 LINC01389:1
5.2 LINC01389:1