Transcript: LINC01389:10

Basic information

LNCipedia transcript ID: LINC01389:10 
LNCipedia gene ID: LINC01389
Location (hg38): chr1:47380715-47386864
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1046 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00001484; NONHSAT003076
Alternative gene names: XLOC_000822; linc-STIL-2;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 12.0351 non-coding 
CPAT coding probability 2.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01389:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-STIL-1:3
3.1 lnc-STIL-1:3
4.0 LINC01389:10
4.1 LINC01389:10
5.0 LINC01389:10
5.1 LINC01389:10
5.2 LINC01389:10