Transcript: LINC01467:2

Basic information

LNCipedia transcript ID: LINC01467:2 
HGNC Gene Symbol: LINC01467    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1467
Ensembl Gene ID: ENSG00000258977
Ensembl Transcript ID: ENST00000554211
RefSeq ID: NR_110074
Location (hg38): chr14:81605347-81623061
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1187 bp
Exons: 3
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: TCONS_00022379; ENST00000554211; ENST00000554211.1; RP11-799P8.1-001; OTTHUMT00000413271.1; NONHSAT038067; NR_110074; NR_110074.1
Alternative gene names: XLOC_011088; linc-SEL1L-1; ENSG00000258977; RP11-799P8.1; ENSG00000258977.1; OTTHUMG00000171398.1; LINC01467;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 1.5501 non-coding 
CPAT coding probability 5.22% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01467:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SEL1L-1:1
3.1 lnc-SEL1L-1:1
4.0 LINC01467:2
4.1 LINC01467:2
5.0 LINC01467:2
5.1 LINC01467:2
5.2 LINC01467:2