Transcript: LINC01806:15

Basic information

LNCipedia transcript ID: LINC01806:15 
LNCipedia gene ID: LINC01806
Location (hg38): chr2:161244738-161255442
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 8344 bp
Exons: 3
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT075168; FPKM1_group_17540_transcript_5
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -0.4808 non-coding 
CPAT coding probability 0.69% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01806:15 no no no no

Available literature

  1. Di Salvo (2015), Right ventricular long noncoding RNA expression in human heart failure., Pulm Circ


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TANK-1:4
4.0 lnc-TANK-1:4
4.1 lnc-TANK-1:4
5.0 lnc-TANK-1:4
5.1 LINC01806:2
5.2 LINC01806:15