Transcript: LINC01908:3

Basic information

LNCipedia transcript ID: LINC01908:3 
HGNC Gene Symbol: LINC01908    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1908
Ensembl Gene ID: ENSG00000265374
Ensembl Transcript ID: ENST00000583148
Location (hg38): chr18:27225742-27247188
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 555 bp
Exons: 5
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000583148.1; RP11-57J16.1-001; OTTHUMT00000446447.1; NONHSAT058770
Alternative gene names: ENSG00000265374.1; RP11-57J16.1; OTTHUMG00000179451.1; LINC01908


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -5.9427 non-coding 
CPAT coding probability 1.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01908:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TAF4B-5:1
4.0 lnc-TAF4B-5:1
4.1 lnc-TAF4B-5:1
5.0 lnc-TAF4B-5:1
5.1 LINC01908:2
5.2 LINC01908:3