Transcript: LINC02031:3

Basic information

LNCipedia transcript ID: LINC02031:3 
HGNC Gene Symbol: LINC02031    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2031
Ensembl Gene ID: ENSG00000238837
Ensembl Transcript ID: ENST00000492416
Location (hg38): chr3:182644214-182655880
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 592 bp
Exons: 5
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000492416; ENST00000492416.2; RP11-646E18.2-001; OTTHUMT00000350610.2; NONHSAT093619
Alternative gene names: ENSG00000238837; RP11-646E18.2; ENSG00000238837.3; OTTHUMG00000158297.2; LINC02031


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -51.1482 non-coding 
CPAT coding probability 1.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02031:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ATP11B-2:1
3.1 lnc-ATP11B-3:1
4.0 lnc-ATP11B-3:1
4.1 lnc-ATP11B-3:1
5.0 lnc-ATP11B-3:1
5.1 LINC02031:2
5.2 LINC02031:3