Transcript: MRGPRF-AS1:5

Basic information

LNCipedia transcript ID: MRGPRF-AS1:5 
HGNC Gene Symbol: MRGPRF-AS1    
HGNC Full Gene Name: MRGPRF antisense RNA 1
Ensembl Gene ID: ENSG00000256508
Ensembl Transcript ID: ENST00000538407
Location (hg38): chr11:69012431-69018447
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1490 bp
Exons: 6
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000538407.2; RP11-554A11.6-001; OTTHUMT00000421418.1; NONHSAT022562
Alternative gene names: ENSG00000256508.2; RP11-554A11.6; OTTHUMG00000172940.1; MRGPRF-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -14.4874 non-coding 
CPAT coding probability 5.52% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MRGPRF-AS1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TPCN2-2:4
4.0 MRGPRF-AS1:5
4.1 MRGPRF-AS1:5
5.0 MRGPRF-AS1:5
5.1 MRGPRF-AS1:5
5.2 MRGPRF-AS1:5