Transcript: RB1-DT:14

Basic information

LNCipedia transcript ID: RB1-DT:14 
LNCipedia gene ID: RB1-DT
Location (hg38): chr13:48295028-48303701
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 2468 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000231473.2|MICT00000094347.1
Alternative gene names: ncRNA-RB1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 5.4505 non-coding 
CPAT coding probability 0.26% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
RB1-DT:14 no no no no

Available literature

  1. Musahl (2015), A long non-coding RNA links calreticulin-mediated immunogenic cell removal to RB1 transcription., Oncogene


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LINC00441:10
5.0 LINC00441:10
5.1 RB1-DT:3
5.2 RB1-DT:14