Transcript: SMC5-AS1:3

Basic information

LNCipedia transcript ID: SMC5-AS1:3 
LNCipedia gene ID: SMC5-AS1
Location (hg38): chr9:70257111-70258814
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 1704 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT131810
Alternative gene names: MAMDC2-AS2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -49.7469 non-coding 
CPAT coding probability 5.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
SMC5-AS1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KLF9-3:3
4.0 SMC5-AS1:3
4.1 SMC5-AS1:3
5.0 SMC5-AS1:3
5.1 SMC5-AS1:3
5.2 SMC5-AS1:3