Transcript: lnc-AKR1B1-1:1

Basic information

LNCipedia transcript ID: lnc-AKR1B1-1:1 
LNCipedia gene ID: lnc-AKR1B1-1
Location (hg38): chr7:134417393-134418009
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 482 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00013975; NONHSAT123463
Alternative gene names: XLOC_006613; linc-SLC35B4-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -15.9602 non-coding 
CPAT coding probability 0.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AKR1B1-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AKR1B1-1:1
3.1 lnc-AKR1B1-1:1
4.0 lnc-AKR1B1-1:1
4.1 lnc-AKR1B1-1:1
5.0 lnc-AKR1B1-1:1
5.1 lnc-C7orf49-14:10
5.2 lnc-AKR1B1-1:1