Transcript: lnc-AKR1B1-1:4

Basic information

LNCipedia transcript ID: lnc-AKR1B1-1:4 
LNCipedia gene ID: lnc-AKR1B1-1
Ensembl Gene ID: ENSG00000273297
Ensembl Transcript ID: ENST00000609209
Location (hg38): chr7:134417782-134432416
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 889 bp
Exons: 3
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000609209.1
Alternative gene names: ENSG00000273297.1; RP11-38M8.1; AC009275.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -22.3745 non-coding 
CPAT coding probability 2.99% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-AKR1B1-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AKR1B1-1:4
4.0 lnc-AKR1B1-1:4
4.1 lnc-AKR1B1-1:4
5.0 lnc-AKR1B1-1:4
5.1 lnc-C7orf49-14:9
5.2 lnc-AKR1B1-1:4