Transcript: lnc-ALDH1B1-6:2

Basic information

LNCipedia transcript ID: lnc-ALDH1B1-6:2 
LNCipedia gene ID: lnc-ALDH1B1-6
Location (hg38): chr9:38437709-38469784
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 492 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000105415.1|ENCT00000445803.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 300.9821 coding 
CPAT coding probability 0.74% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ALDH1B1-6:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-C9orf51-1:3
5.0 lnc-C9orf51-1:3
5.1 lnc-DCAF10-11:2
5.2 lnc-ALDH1B1-6:2