Transcript: lnc-ALG1L-5:1

Basic information

LNCipedia transcript ID: lnc-ALG1L-5:1 
LNCipedia gene ID: lnc-ALG1L-5
Location (hg38): chr3:125787888-125788146
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 259 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT091612
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -45.4661 non-coding 
CPAT coding probability 1.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ALG1L-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ALG1L-5:1
4.0 lnc-ALG1L-5:1
4.1 lnc-ALG1L-5:1
5.0 lnc-ALG1L-5:1
5.1 lnc-SLC41A3-6:1
5.2 lnc-ALG1L-5:1