Transcript: lnc-AMELY-8:1

Basic information

LNCipedia transcript ID: lnc-AMELY-8:1 
LNCipedia gene ID: lnc-AMELY-8
Location (hg38): chrY:7742595-7822860
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1991 bp
Exons: 6
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000442584.1; AC007275.2-001; OTTHUMT00000098416.2; NONHSAT139364
Alternative gene names: ENSG00000234795.3; AC007275.2; OTTHUMG00000041015.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 198.2875 coding 
CPAT coding probability 0.93% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-AMELY-8:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AMELY-8:1
4.0 lnc-AMELY-8:1
4.1 lnc-AMELY-8:1
5.0 lnc-AMELY-8:1
5.1 lnc-DAZ1-137:1
5.2 lnc-AMELY-8:1