Transcript: lnc-ANKRD1-1:4

Basic information

LNCipedia transcript ID: lnc-ANKRD1-1:4 
LNCipedia gene ID: lnc-ANKRD1-1
Location (hg38): chr10:91023164-91023478
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 315 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000000417.1|FTMT23800004955.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -357.9651 non-coding 
CPAT coding probability 1.72% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANKRD1-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ANKRD1-1:4
5.0 lnc-ANKRD1-1:4
5.1 lnc-HTR7-1:9
5.2 lnc-ANKRD1-1:4