Transcript: lnc-APBB1IP-1:5

Basic information

LNCipedia transcript ID: lnc-APBB1IP-1:5 
LNCipedia gene ID: lnc-APBB1IP-1
Location (hg38): chr10:26590064-26594325
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 770 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00018689; NONHSAT011839
Alternative gene names: XLOC_008419; linc-PDSS1-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 114.823 coding 
CPAT coding probability 93.63% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-APBB1IP-1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-APBB1IP-1:5
3.1 lnc-APBB1IP-1:5
4.0 lnc-APBB1IP-1:5
4.1 lnc-APBB1IP-1:5
5.0 lnc-APBB1IP-1:5
5.1 lnc-NPY4R2-256:9
5.2 lnc-APBB1IP-1:5