Transcript: lnc-BRF2-9:10

Basic information

LNCipedia transcript ID: lnc-BRF2-9:10 
LNCipedia gene ID: lnc-BRF2-9
Location (hg38): chr8:37325418-37329767
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3643 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00014970; NONHSAT126028
Alternative gene names: XLOC_007052; linc-DUSP26-4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -30.8546 non-coding 
CPAT coding probability 10.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-BRF2-9:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RP11-150O12.1.1-2:4
3.1 lnc-RP11-150O12.1.1-1:4
4.0 lnc-RP11-150O12.1.1-2:4
4.1 lnc-RP11-150O12.1.1-2:4
5.0 lnc-RP11-150O12.1.1-2:4
5.1 lnc-C8orf86-49:10
5.2 lnc-BRF2-9:10