Transcript: lnc-BRF2-9:11

Basic information

LNCipedia transcript ID: lnc-BRF2-9:11 
LNCipedia gene ID: lnc-BRF2-9
Location (hg38): chr8:37327216-37329450
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 892 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00014972; NONHSAT126031
Alternative gene names: XLOC_007052; linc-DUSP26-4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -208.1841 non-coding 
CPAT coding probability 42.83% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-BRF2-9:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RP11-150O12.1.1-2:5
3.1 lnc-RP11-150O12.1.1-1:5
4.0 lnc-RP11-150O12.1.1-2:5
4.1 lnc-RP11-150O12.1.1-2:5
5.0 lnc-RP11-150O12.1.1-2:5
5.1 lnc-C8orf86-49:11
5.2 lnc-BRF2-9:11