Transcript: lnc-C9orf66-15:11

Basic information

LNCipedia transcript ID: lnc-C9orf66-15:11 
LNCipedia gene ID: lnc-C9orf66-15
Location (hg38): chr9:454457-469836
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 876 bp
Exons: 4
Sources: NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: NONHSAT129916; ENST00000591577.1
Alternative gene names: ENSG00000227155.3; RP11-165F24.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -94.2172 non-coding 
CPAT coding probability 5.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C9orf66-15:11 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C9orf66-2:6
4.0 lnc-C9orf66-2:6
4.1 lnc-C9orf66-2:6
5.0 lnc-C9orf66-2:6
5.1 lnc-CER1-100:11
5.2 lnc-C9orf66-15:11