Transcript: lnc-C9orf66-15:12

Basic information

LNCipedia transcript ID: lnc-C9orf66-15:12 
LNCipedia gene ID: lnc-C9orf66-15
Ensembl Gene ID: ENSG00000227155
Ensembl Transcript ID: ENST00000591577
Location (hg38): chr9:452492-469836
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1351 bp
Exons: 5
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000591577.5
Alternative gene names: ENSG00000227155.7; RP11-165F24.3; AL161725.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -94.2172 non-coding 
CPAT coding probability 5.69% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C9orf66-15:12 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-C9orf66-2:18
4.1 lnc-C9orf66-2:18
5.0 lnc-C9orf66-2:18
5.1 lnc-CER1-100:12
5.2 lnc-C9orf66-15:12