Transcript: lnc-CDIPT-1:3

Basic information

LNCipedia transcript ID: lnc-CDIPT-1:3 
LNCipedia gene ID: lnc-CDIPT-1
Location (hg38): chr16:29817990-29821220
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 960 bp
Exons: 3
Sources: Biogazelle lncRNA chip
Alternative transcript names: ENST00000500263
Alternative gene names: ENSG00000246900


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -29.0206 non-coding 
CPAT coding probability 12.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CDIPT-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CDIPT-1:1
3.1 lnc-CDIPT-1:3
4.0 lnc-CDIPT-1:3
4.1 lnc-CDIPT-1:3
5.0 lnc-CDIPT-1:3
5.1 lnc-SULT1A2-48:2
5.2 lnc-CDIPT-1:3