Transcript: lnc-CDYL2-5:1

Basic information

LNCipedia transcript ID: lnc-CDYL2-5:1 
LNCipedia gene ID: lnc-CDYL2-5
Location (hg38): chr16:80513490-80521453
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 338 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00024738; NONHSAT143886
Alternative gene names: XLOC_012018; linc-MAF-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -144.0863 non-coding 
CPAT coding probability 2.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CDYL2-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CDYL2-4:1
3.1 lnc-CDYL2-5:1
4.0 lnc-CDYL2-5:1
4.1 lnc-CDYL2-5:1
5.0 lnc-CDYL2-5:1
5.1 lnc-MAF-10:1
5.2 lnc-CDYL2-5:1