Transcript: lnc-CEACAM20-8:5

Basic information

LNCipedia transcript ID: lnc-CEACAM20-8:5 
LNCipedia gene ID: lnc-CEACAM20-8
Ensembl Gene ID: ENSG00000266903
Ensembl Transcript ID: ENST00000591312
Location (hg38): chr19:44715564-44718685
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 752 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000591312.1
Alternative gene names: ENSG00000266903.1; CTB-171A8.1; AC243964.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -14.0912 non-coding 
CPAT coding probability 0.52% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CEACAM20-8:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-GPR4-24:5
5.1 lnc-GPR4-24:5
5.2 lnc-CEACAM20-8:5