Transcript: lnc-CPHXL-3:4

Basic information

LNCipedia transcript ID: lnc-CPHXL-3:4 
LNCipedia gene ID: lnc-CPHXL-3
Location (hg38): chr16:76135639-76147723
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 510 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT143772; FPKM1_group_11948_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -180.9716 non-coding 
CPAT coding probability 2.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CPHXL-3:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC025287.1-2:4
4.0 lnc-AC025287.1-2:4
4.1 lnc-AC025287.1-2:4
5.0 lnc-AC025287.1-2:4
5.1 lnc-MLKL-46:4
5.2 lnc-CPHXL-3:4