Transcript: lnc-CYP1B1-1:3

Basic information

LNCipedia transcript ID: lnc-CYP1B1-1:3 
LNCipedia gene ID: lnc-CYP1B1-1
Location (hg38): chr2:38134221-38239590
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 5883 bp
Exons: 9
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000227292.1|ENCT00000240854.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 15.0287 non-coding 
CPAT coding probability 99.97% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CYP1B1-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CYP1B1-1:3
5.0 lnc-CYP1B1-1:3
5.1 lnc-MAP4K3-33:2
5.2 lnc-CYP1B1-1:3