Transcript: lnc-DEPP1-2:2

Basic information

LNCipedia transcript ID: lnc-DEPP1-2:2 
LNCipedia gene ID: lnc-DEPP1-2
Location (hg38): chr10:45099476-45147889
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1590 bp
Exons: 7
Sources: NONCODE v4
Alternative transcript names: NONHSAT013076
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -4.0729 non-coding 
CPAT coding probability 3.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DEPP1-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C10orf25-2:3
4.0 lnc-C10orf25-2:3
4.1 lnc-C10orf25-2:3
5.0 lnc-C10orf25-2:3
5.1 lnc-LRRC18-74:2
5.2 lnc-DEPP1-2:2