Transcript: lnc-DEPP1-2:8

Basic information

LNCipedia transcript ID: lnc-DEPP1-2:8 
LNCipedia gene ID: lnc-DEPP1-2
Ensembl Gene ID: ENSG00000277757
Ensembl Transcript ID: ENST00000602156
Location (hg38): chr10:45016080-45135640
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 653 bp
Exons: 4
Sources: NONCODE v4; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT013061; ENST00000602156.5
Alternative gene names: ENSG00000277757.4; RP11-285G1.15; AL358394.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -10.5929 non-coding 
CPAT coding probability 0.60% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DEPP1-2:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C10orf25-2:8
4.0 lnc-C10orf25-2:8
4.1 lnc-C10orf25-2:8
5.0 lnc-C10orf25-2:8
5.1 lnc-LRRC18-74:8
5.2 lnc-DEPP1-2:8