Transcript: lnc-DHX38-26:4

Basic information

LNCipedia transcript ID: lnc-DHX38-26:4 
LNCipedia gene ID: lnc-DHX38-26
Ensembl Gene ID: ENSG00000259209
Ensembl Transcript ID: ENST00000624370
Location (hg38): chr16:72807045-72808118
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1074 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000624370.1
Alternative gene names: ENSG00000259209.3; RP5-991G20.2; AC004943.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -27.1048 non-coding 
CPAT coding probability 0.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DHX38-26:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-RP11-44L9.1.1-11:4
4.1 lnc-RP11-44L9.1.1-11:4
5.0 lnc-RP11-44L9.1.1-11:4
5.1 lnc-MARVELD3-36:4
5.2 lnc-DHX38-26:4