Transcript: lnc-DHX38-27:2

Basic information

LNCipedia transcript ID: lnc-DHX38-27:2 
LNCipedia gene ID: lnc-DHX38-27
Location (hg38): chr16:72665133-72747038
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 369 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000259768.3|ENCT00000160522.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -43.5663 non-coding 
CPAT coding probability 0.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DHX38-27:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-DHX38-4:6
5.0 lnc-DHX38-4:6
5.1 lnc-MARVELD3-101:2
5.2 lnc-DHX38-27:2