Transcript: lnc-ENAH-1:1

Basic information

LNCipedia transcript ID: lnc-ENAH-1:1 
LNCipedia gene ID: lnc-ENAH-1
Ensembl Gene ID: ENSG00000226349
Ensembl Transcript ID: ENST00000428148
Location (hg38): chr1:225710968-225736274
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 534 bp
Exons: 3
Sources: Broad Institute; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00000747; ENST00000428148.1; RP11-145A3.2-001; OTTHUMT00000092058.1; NONHSAT009849
Alternative gene names: XLOC_001231; linc-ENAH; ENSG00000226349.1; RP11-145A3.2; OTTHUMG00000037740.1; AC099066.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -78.5751 non-coding 
CPAT coding probability 0.56% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ENAH-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ENAH-1:1
3.1 lnc-ENAH-1:1
4.0 lnc-ENAH-1:1
4.1 lnc-ENAH-1:1
5.0 lnc-ENAH-1:1
5.1 lnc-LEFTY2-11:1
5.2 lnc-ENAH-1:1